.. ProtLego documentation master file, created by sphinx-quickstart on Thu Jun 6 19:37:27 2019. You can adapt this file completely to your liking, but it should at least contain the root `toctree` directive. Welcome to ProtLego! An Open-source Python Library for Chimera Design and Analysis ================================================================================== ProtLego is a tool that enables constructing protein chimeras and its structural analysis. ProtLego is writen in Python, so it facilitates that other scientists can extend it to their needs. With ProtLego, it is possible to go from a pair of PDBs that share a structural fragment in common, to build all possible chimeras between the two, rank them with the AMBER or CHARMM molecular mechanics forcefields, and analyze their structural features (hydrogen networks, salt bridges, hydrophobic clusters...etc.) .. toctree:: :maxdepth: 2 :caption: Code builder database networks energy analyse .. toctree:: :maxdepth: 2 :caption: User Guide installation fuzzle .. toctree:: :maxdepth: 2 :caption: Tutorials introduction fetching network building energy structural Publications ============ **Protlego: A Python package for the analysis and design of chimeric proteins.** Noelia Ferruz, Jakob Noske, Birte Höcker.